2024 Calendar Year

Davies, Brandon
  • Spitler KM, Shetty SK, Davies BSJ. (2024). Effects of Age and Diet on Triglyceride Metabolism in Mice. bioRxiv. Issue 01/01/2024. DOI: 10.1101/2024.07.19.602944
  • Sylvers-Davie KL, Bierstedt KC, Schnieders MJ, Davies BSJ. (2024). Endothelial lipase variant T111I does not alter inhibition by angiopoietin-like proteins. Scientific Reports. 14(1). DOI: : 10.1038/s41598-024-54705-6
  • Jin Z, De U, Tithi TI, Kleberg J, Nataraj A, Jolley E, Carelock ME, Davies BSJ, Zhang W, Kolb R. (2024). ANGPTL4 Suppresses Clear Cell Renal Cell Carcinoma via Inhibition of Lysosomal Acid Lipase. Cancer Research Communications. 4(8):2242-2254. DOI: 10.1158/2767-9764.CRC-24-0016

DeMali, Kris
  • Cronin NM, Dawson LW, DeMali, KA. (2024). Shear stress-stimulated AMPK couples endothelial cell mechanics, metabolism and vasodilation. Journal of Cell Science. 137(24). DOI: 10.1242/jcs.262232
  • Cronin NM, Dawson LW, DeMali KA. (2024). Mechanical activation of VE-cadherin stimulates AMPK to increase endothelial cell metabolism and vasodilation. bioRxiv. Issue 01/01/2024. DOI: 10.1101/2024.05.09.59317

Elcock, Adrian
  • McDonnell RT, Elcock AH. (2024). AutoRNC: An automated modeling program for building atomic models of ribosomenascent chain complexes. Structure. 32(5):621-629.e5 DOI: 10.1016/j.str.2024.02.002
  • Sanaboyana VR, Elcock AH. (2024). Improving Signal and Transit Peptide Predictions Using AlphaFold2-predicted Protein Structures. Journal of Molecular Biology. 436(2). DOI: 10.1016/j.jmb.2023.168393
  • McDonnell RT, Henderson AN, Elcock AH. (2024). Structure Prediction of Large RNAs with AlphaFold3 Highlights its Capabilities and Limitations. Journal of Molecular Biology. 436(22). DOI: 10.1016/j.jmb.2024.168816

Fuentes, Ernesto
  • Basu S, Subedi U, Tonelli M, Afshinpour M, Tiwari N, Fuentes EJ, Chakravarty S. (2024). Assessing the functional roles of coevolving PHD finger residues. Protein Science. 33(7). DOI: 10.1002/pro.5065

Geyer, Pamela
  • Jones SD, Miller JEB, Amos MM, Hernandez JM, Piaszynski KM, Geyer PK. (2024). Emerin preserves stem cell survival through maintenance of centrosome and nuclear lamina structure. Development (Cambridge). 151(22). DOI: 10.1242/dev.204219
  • Perales IE, Jones SD, Piaszynski KM, Geyer PK. (2024). Developmental changes in nuclear lamina components during germ cell differentiation. Nucleus. 15(1). DOI: 10.1080/19491034.2024.2339214
  • Geyer PK, Hoffmann DS, Barr JY, Widmayer HA, Blaumueller CM. (2024). Granting access: Development of a formal course to demystify and promote predoctoral fellowship applications for graduate students. PLoS ONE.19(4). DOI: 10.1371/journal.pone.0301480
  • Perales IE, Jones SD, Duan T, Geyer PK. (2024). Maintenance of germline stem cell homeostasis despite severe nuclear distortion. Developmental Biology. 515:139-150. DOI: 10.1016/j.ydbio.2024.07.009
  • Fuller MJ, Mix MR, Voigt E, Hoffmann DS, Geyer PK. (2024). Guidelines for organizing accessible and inclusive research retreats. Trends in Biochemical Sciences. 49(4):277-279. DOI: 10.1016/j.tibs.2023.12.003

Pufall, Miles
  • Zimmerman JAO, Fang M, Pufall MA. (2024). PI3Kδ Inhibition Potentiates Glucocorticoids in B-lymphoblastic Leukemia by Decreasing Receptor Phosphorylation and Enhancing Gene Regulation. Cancers. 16(1). DOI: 10.3390/cancers16010143
  • Spector BM, Santana JF, Pufall MA, Price DH. (2024). DFF-ChIP: a method to detect and quantify complex interactions between RNA polymerase II, transcription factors, and chromatin. Nucleic Acids Research. 52(18):e88. DOI: 10.1093/nar/gkae760

Spies, Maria
  • Pavankumar TL, Jason Wong C, Wong YK, Spies M, Kowalczykowski SC. (2024). Trans-complementation by the RecB nuclease domain of RecBCD enzyme reveals new insight into RecA loading upon χ recognition. Nucleic Acids Research. 52(5):2578-2589. DOI: 10.1093/nar/gkae007
  • Kuppa S, Corless E, Caldwell CC, Spies M, Antony E. (2024). Generation of site-specifically labelled fluorescent human XPA to investigate DNA binding dynamics during nucleotide excision repair. Methods. 224:47-53. DOI: 10.1016/j.ymeth.2024.02.006
  • Alshareedah I, Pangeni S, Dewan PA, Honda M, Liao T-W, Spies M, Ha T. (2024). The human RAD52 complex undergoes phase separation and facilitates bundling and end-to-end tethering of RAD51 presynaptic filaments. bioRxiv. Issue 12/12/2024. DOI: 10.1101/2024.12.09.627445 
  • Hengel SR, Oppenheimer KG, Smith CM, Schaich MA, Rein HL, Martino J, Darrah KE, Witham M, Ezekwenna OC, Burton KR, Van Houten B, Spies M, Bernstein KA. (2024). The human Shu complex promotes RAD51 activity by modulating RPA dynamics on ssDNA. Nature Communications. 15(1). DOI: 10.1038/s41467-024-51595-0
  • Srivastava D, Gowribidanur-Chinnaswamy P, Gaur P, Spies M, Swaroop A, Artemyev NO. (2024). Molecular basis of CRX/DNA recognition and stoichiometry at the Ret4 response element. Structure. 32(10):1751-1759.e4. DOI: 10.1016/j.str.2024.07.004
  • Spies M. (2024). Introducing NAR Molecular Medicine, a new journal in the Nucleic Acids Research family. NAR Molecular Medicine. Issue 01/23/2024. DOI: 10.1093/narmme/ugad002
  • Granger SL, Sharma R, Kaushik V, Razzaghi M, Honda M, Gaur P, Bhat DS, Labenz SM, Heinen JE, Williams BA, Tabei SMA, Wlodarski MW, Antony E, Spies M. (2024). Human hnRNPA1 reorganizes telomere-bound replication protein A. Nucleic Acids Research. 52(20):12422-12437. DOI: 10.1093/nar/gkae834

Wallrath Lori
  • Herndon ME, Ayers M, Gibson-Corley KN, Wendt MK, Wallrath LL, Henry MD, Stipp CS. (2024). The highly metastatic 4T1 breast carcinoma model possesses features of a hybrid epithelial/mesenchymal phenotype. DMM Disease Models and Mechanisms. 17(9). DOI: 10.1242/dmm.050771
  • Mohar NP, Cox EM, Adelizzi E, Moore SA, Mathews KD, Darbro BW, Wallrath LL. (2024). The Influence of a Genetic Variant in CCDC78 on LMNA-Associated Skeletal Muscle Disease. International Journal of Molecular Sciences. 25(9). DOI: 10.3390/ijms25094930